BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007B11SP1|AL425650
(673 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1349 438 e-123
>3x_Contig1349
Length = 5890
Score = 438 bits (214), Expect = e-123
Identities = 356/414 (85%), Gaps = 5/414 (1%)
Strand = Plus / Plus
Query: 262 ttccagctcgt-ggtcggtactatcgaggaggactatgtwatcttgtacttgtttgtwka 320
||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 42 ttccagctcgttggtcggtactatcgaggaggactatgtaatcttgtacttgtttgtaga 101
Query: 321 ttgccttgatttcwgtyttcatgtacgttkaggatgacgataatgatgktwatgcttggt 380
||||||||||||| || | |||||||| | |||||||||||||||||| |||| |||
Sbjct: 102 ttgccttgatttcagtctccatgtacgatgaggatgacgataatgatggcaatgcctgg- 160
Query: 381 kgtatgttgttgttttttttgttgttkttgttatttattcttattgtgttcttggtatct 440
||||||||||||| || |||||||| |||||||| ||||| || |||| || |||||||
Sbjct: 161 ggtatgttgttgttgttgttgttgttgttgttattaattctcatggtgtcctgggtatct 220
Query: 441 gacttttgggtgtgagtgtgtttgtwtttttwtctkggtttwgwtttktagtcttgtaat 500
||| |||||| | ||| |||||||| ||| | ||| ||||| | ||| ||||| || |||
Sbjct: 221 gacatttggg-gcgag-gtgtttgtatttgtatctgggtttagatttgtagtcatgaaat 278
Query: 501 atkggatattkt-ttattgcatgaktgaatgtktgtttggtttcattttkaattcgttag 559
|| |||||| | ||||||||| ||||| |||||| ||||| || ||||||||||
Sbjct: 279 atgggatatcgtcccattgcatgagcgaatgagagtttggattcatgttgaattcgttag 338
Query: 560 ttgawatttctttcatggtwcgaggagcaatttkkgcacatgacgtggtgatgttgtttt 619
|| ||| |||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 339 aagaaattgctttcatggtacgaggagcaatttgggcacatgacgtggtgatgttgtttt 398
Query: 620 tttcttcgagtaactcagagttgtatattagattwccactgaaaaagaagctgt 673
|||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 399 tttcttcgagtaactcagagttgtatattagattaccactgaaaaagaagctgt 452
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.718 1.34
Gapped
Lambda K H
1.42 0.718 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3725
Number of Sequences: 1807
Number of extensions: 3725
Number of successful extensions: 122
Number of sequences better than 1.0e-20: 1
length of query: 673
length of database: 10,358,551
effective HSP length: 16
effective length of query: 657
effective length of database: 10,329,639
effective search space: 6786572823
effective search space used: 6786572823
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.7 bits)
S1: 11 (23.0 bits)
S2: 49 (100.8 bits)